Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase | D4M06_RS18520 | Not Available | Negative | 3931881 - 3935564 | 136048.0 |
| glyoxylate bypass operon transcriptional repressor iclr | D4M06_RS18525 | Not Available | Positive | 3935764 - 3936588 | 29741.1 |
| shet2/espl2 family type iii secretion system effector toxin | D4M06_RS18530 | Not Available | Positive | 3936905 - 3939091 | 82577.9 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | D4M06_RS18535 | Not Available | Negative | 3939060 - 3940796 | 67738.4 |
| isocitrate lyase | D4M06_RS18540 | Not Available | Negative | 3940980 - 3942284 | 47511.0 |
| malate synthase a | D4M06_RS18545 | Not Available | Negative | 3942314 - 3943915 | 60278.9 |
| homoserine o-succinyltransferase | D4M06_RS18550 | Not Available | Negative | 3944184 - 3945113 | 35786.3 |
| acetyltransferase | D4M06_RS18555 | Not Available | Positive | 3945270 - 3945713 | 16521.8 |
| glutamate decarboxylase | D4M06_RS18560 | Not Available | Negative | 3945822 - 3946558 | 27899.3 |
| insulinase family protein | D4M06_RS18565 | Not Available | Negative | 3946919 - 3949714 | 104738.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




