Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lbetah domain-containing protein | D4M06_RS18150 | Not Available | Positive | 3853996 - 3854976 | 35876.4 |
| ydch family protein | D4M06_RS18160 | Not Available | Negative | 3855570 - 3855794 | 8945.83 |
| glucan biosynthesis protein | D4M06_RS18165 | Not Available | Negative | 3855934 - 3857589 | 62771.2 |
| voc family protein | D4M06_RS18170 | Not Available | Negative | 3857814 - 3859157 | 51001.6 |
| lysr family transcriptional regulator | D4M06_RS18175 | Not Available | Positive | 3859374 - 3860297 | 33359.5 |
| methyl-accepting chemotaxis protein trg | D4M06_RS18180 | Not Available | Negative | 3860335 - 3861975 | 58936.5 |
| type i toxin-antitoxin system toxin hokb | D4M06_RS18185 | Not Available | Positive | 3862374 - 3862523 | 5675.23 |
| hypothetical protein | D4M06_RS18190 | Not Available | Negative | 3862595 - 3862768 | 5830.16 |
| cytochrome b561 | D4M06_RS18195 | Not Available | Negative | 3863013 - 3863543 | 20287.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | D4M06_RS18200 | Not Available | Positive | 3863732 - 3864733 | 35764.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




