Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent aminotransferase family protein | D4M06_RS18100 | Not Available | Negative | 3844782 - 3846188 | 52808.9 |
| type ii toxin-antitoxin system antitoxin hicb | D4M06_RS18105 | Not Available | Negative | 3846267 - 3846683 | 15247.5 |
| type ii toxin-antitoxin system mrna interferase toxin hica | D4M06_RS18110 | Not Available | Negative | 3846729 - 3846905 | 6782.3 |
| yncj family protein | D4M06_RS18115 | Not Available | Positive | 3847127 - 3847357 | 8709.32 |
| 23s rrna 5-hydroxycytidine c2501 synthase | D4M06_RS18120 | Not Available | Negative | 3847449 - 3849410 | 72705.9 |
| helix-turn-helix domain-containing protein | D4M06_RS18125 | Not Available | Negative | 3849483 - 3850019 | 19754.5 |
| bene family transporter ydco | D4M06_RS18130 | Not Available | Positive | 3850072 - 3851283 | 41940.6 |
| duf3313 domain-containing protein | D4M06_RS18135 | Not Available | Negative | 3851318 - 3851986 | 24428.3 |
| tellurite resistance methyltransferase tehb | D4M06_RS18140 | Not Available | Negative | 3852290 - 3852883 | 22408.8 |
| dicarboxylate transporter/tellurite-resistance protein teha | D4M06_RS18145 | Not Available | Negative | 3852880 - 3853872 | 35930.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




