Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbria minor subunit fimf | D4M06_RS18000 | Not Available | Negative | 3823981 - 3824511 | 18716.3 |
| fimbrial biogenesis usher protein fimd | D4M06_RS18005 | Not Available | Negative | 3824521 - 3827059 | 92554.8 |
| type vi secretion system tip protein vgrg | D4M06_RS18010 | Not Available | Negative | 3827060 - 3828216 | 44223.9 |
| ynch family protein | D4M06_RS18015 | Not Available | Negative | 3829037 - 3829249 | 8262.62 |
| glutathione s-transferase family protein | D4M06_RS18020 | Not Available | Negative | 3829325 - 3829942 | 23330.0 |
| l-asparagine permease | D4M06_RS18025 | Not Available | Positive | 3830209 - 3831708 | 54236.3 |
| ynce family protein | D4M06_RS18030 | Not Available | Negative | 3831823 - 3832884 | 38670.2 |
| tonb-dependent receptor | D4M06_RS18035 | Not Available | Positive | 3833126 - 3835228 | 77309.0 |
| gntr family transcriptional regulator | D4M06_RS18040 | Not Available | Negative | 3835264 - 3835929 | 25225.1 |
| nadph-dependent curcumin/dihydrocurcumin reductase | D4M06_RS18045 | Not Available | Negative | 3836127 - 3837164 | 37611.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




