Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf262 domain-containing protein | D4M06_RS17830 | Not Available | Negative | 3781652 - 3783010 | 52876.4 |
| duf262 domain-containing protein | D4M06_RS17835 | Not Available | Negative | 3783019 - 3783303 | 10874.9 |
| dead/deah box helicase family protein | D4M06_RS17840 | Not Available | Positive | 3783581 - 3786013 | 92089.1 |
| n-6 dna methylase | D4M06_RS17845 | Not Available | Positive | 3786044 - 3787549 | 56675.5 |
| restriction endonuclease subunit s | D4M06_RS17850 | Not Available | Positive | 3787549 - 3789303 | 66107.1 |
| endoribonuclease syme | D4M06_RS17855 | Not Available | Positive | 3789524 - 3789865 | 12294.8 |
| duf1524 domain-containing protein | D4M06_RS17860 | Not Available | Negative | 3789912 - 3791075 | 45336.9 |
| duf262 domain-containing protein | D4M06_RS17865 | Not Available | Negative | 3791123 - 3792004 | 33797.9 |
| duf1127 domain-containing protein | D4M06_RS17870 | Not Available | Negative | 3792101 - 3792265 | 6808.31 |
| plp-dependent aminotransferase family protein | D4M06_RS17875 | Not Available | Positive | 3792442 - 3793854 | 53050.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




