Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2501 domain-containing protein | D4M06_RS17780 | Not Available | Positive | 3768609 - 3769103 | 17381.7 |
| phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | D4M06_RS17785 | Not Available | Positive | 3769357 - 3771648 | 85528.7 |
| zinc-binding alcohol dehydrogenase family protein | D4M06_RS17790 | Not Available | Negative | 3771785 - 3772807 | 36377.9 |
| gntr family transcriptional regulator | D4M06_RS17795 | Not Available | Positive | 3772946 - 3773860 | 35390.2 |
| mfs transporter | D4M06_RS17800 | Not Available | Positive | 3774075 - 3775436 | 49446.5 |
| methyl-accepting chemotaxis protein | D4M06_RS17805 | Not Available | Negative | 3775485 - 3777149 | 59813.9 |
| hypothetical protein | D4M06_RS17810 | Not Available | Positive | 3777378 - 3777920 | 21615.1 |
| pyruvate/proton symporter btst | D4M06_RS17815 | Not Available | Positive | 3778213 - 3780363 | 77314.5 |
| ybdd/yjix family protein | D4M06_RS17820 | Not Available | Positive | 3780413 - 3780616 | 7729.24 |
| gtpase | D4M06_RS17825 | Not Available | Positive | 3780627 - 3781583 | 35694.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




