Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial biogenesis outer membrane usher protein | D4M06_RS17680 | Not Available | Positive | 3749402 - 3751861 | 90466.7 |
| molecular chaperone | D4M06_RS17685 | Not Available | Positive | 3751876 - 3752607 | 27489.2 |
| fimbrial protein | D4M06_RS17690 | Not Available | Positive | 3752604 - 3753665 | 39679.9 |
| abrb family transcriptional regulator | D4M06_RS17695 | Not Available | Positive | 3753814 - 3754860 | 36944.2 |
| endonuclease viii | D4M06_RS17700 | Not Available | Negative | 3754857 - 3755648 | 29812.8 |
| 5-oxoprolinase subunit pxpa | D4M06_RS17705 | Not Available | Negative | 3755684 - 3756418 | 25865.9 |
| 5-oxoprolinase subunit pxpc | D4M06_RS17710 | Not Available | Negative | 3756408 - 3757340 | 34432.6 |
| 5-oxoprolinase subunit pxpb | D4M06_RS17715 | Not Available | Negative | 3757334 - 3757990 | 23948.0 |
| radiation resistance protein ybgi | D4M06_RS17720 | Not Available | Negative | 3758013 - 3758756 | 26894.0 |
| dipeptide permease dtpd | D4M06_RS17725 | Not Available | Positive | 3759027 - 3760508 | 54233.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




