Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-forming succinate--coa ligase subunit beta | D4M06_RS17630 | Not Available | Negative | 3737585 - 3738751 | 41395.1 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | D4M06_RS17635 | Not Available | Negative | 3738845 - 3740062 | 44014.0 |
| 2-oxoglutarate dehydrogenase e1 component | D4M06_RS17640 | Not Available | Negative | 3740077 - 3742878 | 105068.0 |
| succinate dehydrogenase iron-sulfur subunit | D4M06_RS17645 | Not Available | Negative | 3743179 - 3743895 | 26785.4 |
| succinate dehydrogenase flavoprotein subunit | D4M06_RS17650 | Not Available | Negative | 3743911 - 3745677 | 64425.6 |
| succinate dehydrogenase membrane anchor subunit | D4M06_RS17655 | Not Available | Negative | 3745677 - 3746024 | 12824.3 |
| succinate dehydrogenase cytochrome b556 subunit | D4M06_RS17660 | Not Available | Negative | 3746018 - 3746422 | 14948.9 |
| hypothetical protein | D4M06_RS17665 | Not Available | Positive | 3746803 - 3746910 | 3827.66 |
| citrate (si)-synthase | D4M06_RS17670 | Not Available | Positive | 3747116 - 3748399 | 47984.6 |
| type 1 fimbrial protein | D4M06_RS17675 | Not Available | Positive | 3748786 - 3749352 | 19976.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




