Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate mutase | D4M06_RS17580 | Not Available | Positive | 3725516 - 3726904 | 50465.4 |
| methylaspartate mutase subunit e | D4M06_RS17585 | Not Available | Positive | 3726923 - 3728368 | 53070.8 |
| methylaspartate ammonia-lyase | D4M06_RS17590 | Not Available | Positive | 3728368 - 3729609 | 45580.7 |
| duf1446 domain-containing protein | D4M06_RS17595 | Not Available | Positive | 3729613 - 3730983 | 49141.6 |
| duf4387 domain-containing protein | D4M06_RS17600 | Not Available | Positive | 3730980 - 3731297 | 11912.4 |
| dicarboxylate/amino acid:cation symporter | D4M06_RS17605 | Not Available | Positive | 3731458 - 3732738 | 45263.0 |
| class i fumarate hydratase | D4M06_RS17610 | Not Available | Positive | 3732846 - 3734498 | 60130.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | D4M06_RS17615 | Not Available | Positive | 3734508 - 3735110 | 22373.7 |
| lysr family transcriptional regulator | D4M06_RS17620 | Not Available | Negative | 3735144 - 3736049 | 34393.5 |
| succinate--coa ligase subunit alpha | D4M06_RS17625 | Not Available | Negative | 3736716 - 3737585 | 29779.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




