Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colicin uptake protein tolr | D4M06_RS17530 | Not Available | Negative | 3717446 - 3717874 | 15383.9 |
| tol-pal system protein tolq | D4M06_RS17535 | Not Available | Negative | 3717878 - 3718570 | 25599.2 |
| tol-pal system-associated acyl-coa thioesterase | D4M06_RS17540 | Not Available | Negative | 3718567 - 3718971 | 15562.9 |
| cyd operon protein ybge | D4M06_RS17545 | Not Available | Negative | 3719121 - 3719414 | 10933.0 |
| cytochrome bd-i oxidase subunit cydx | D4M06_RS17550 | Not Available | Negative | 3719414 - 3719527 | 4041.9 |
| cytochrome d ubiquinol oxidase subunit ii | D4M06_RS17555 | Not Available | Negative | 3719542 - 3720681 | 42455.6 |
| cytochrome ubiquinol oxidase subunit i | D4M06_RS17560 | Not Available | Negative | 3720697 - 3722265 | 58208.4 |
| hypothetical protein | D4M06_RS17565 | Not Available | Positive | 3723071 - 3724015 | 36363.1 |
| hypothetical protein | D4M06_RS17570 | Not Available | Positive | 3724097 - 3724519 | 15746.6 |
| methylaspartate mutase subunit s | D4M06_RS17575 | Not Available | Positive | 3725067 - 3725516 | 16430.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




