Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna packaging protein | D4M06_RS24610 | Not Available | Positive | 5088213 - 5090141 | 72699.6 |
| Head-tail connector gpw | D4M06_RS24615 | Not Available | Positive | 5090125 - 5090331 | 7674.37 |
| Bacteriophage portal protein | D4M06_RS24620 | Not Available | Positive | 5090328 - 5091920 | 59652.5 |
| Bacteriophage prohead protease | D4M06_RS24625 | Not Available | Positive | 5091910 - 5093415 | 52329.9 |
| Bacteriophage head decoration protein | D4M06_RS24630 | Not Available | Positive | 5093452 - 5093799 | 11997.2 |
| Bacteriophage major capsid protein | D4M06_RS24635 | Not Available | Positive | 5093857 - 5094123 | 10294.7 |
| Major tail protein v | D4M06_RS24640 | Not Available | Positive | 5094105 - 5094845 | 25930.2 |
| Tail component | D4M06_RS24645 | Not Available | Positive | 5094859 - 5095290 | 15626.4 |
| Tail component | D4M06_RS24650 | Not Available | Positive | 5095317 - 5095730 | 15239.0 |
| Tail component | D4M06_RS24655 | Not Available | Positive | 5095711 - 5097641 | 70524.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




