Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-8-phosphooctulonate synthase | D4M06_RS17225 | Not Available | Negative | 3660635 - 3661489 | 30862.5 |
| tetratricopeptide repeat-containing protein | D4M06_RS17230 | Not Available | Negative | 3661525 - 3662334 | 30843.1 |
| sirb family protein | D4M06_RS17235 | Not Available | Negative | 3662338 - 3662730 | 14595.6 |
| peptide chain release factor n(5)-glutamine methyltransferase | D4M06_RS17240 | Not Available | Negative | 3662727 - 3663560 | 31017.8 |
| peptide chain release factor 1 | D4M06_RS17245 | Not Available | Negative | 3663560 - 3664642 | 40519.6 |
| glutamyl-trna reductase | D4M06_RS17250 | Not Available | Negative | 3664684 - 3665940 | 46309.5 |
| lipoprotein localization protein lolb | D4M06_RS17255 | Not Available | Positive | 3666154 - 3666777 | 23552.1 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | D4M06_RS17260 | Not Available | Positive | 3666777 - 3667628 | 30927.1 |
| ribose-phosphate pyrophosphokinase | D4M06_RS17265 | Not Available | Positive | 3667779 - 3668726 | 34220.3 |
| c4-dicarboxylic acid transporter daua | D4M06_RS17270 | Not Available | Positive | 3668851 - 3670530 | 59432.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




