Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein tripeptide/oligopeptide abc transporter atp binding protein oppf | D4M06_RS17060 | Not Available | Negative | 3625924 - 3626928 | 37183.8 |
| murein tripeptide/oligopeptide abc transporter atp binding protein oppd | D4M06_RS17065 | Not Available | Negative | 3626925 - 3627938 | 37167.7 |
| oligopeptide abc transporter permease oppc | D4M06_RS17070 | Not Available | Negative | 3627950 - 3628858 | 33023.9 |
| oligopeptide abc transporter permease oppb | D4M06_RS17075 | Not Available | Negative | 3628873 - 3629793 | 33445.3 |
| oligopeptide abc transporter substrate-binding protein oppa | D4M06_RS17080 | Not Available | Negative | 3629879 - 3631510 | 60979.1 |
| naat family transporter yche | D4M06_RS17085 | Not Available | Negative | 3632248 - 3632895 | 23488.7 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | D4M06_RS17090 | Not Available | Positive | 3633372 - 3636047 | 96132.5 |
| thymidine kinase | D4M06_RS17095 | Not Available | Negative | 3636348 - 3636965 | 23399.9 |
| dna-binding transcriptional regulator h-ns | D4M06_RS17100 | Not Available | Positive | 3637569 - 3637982 | 15540.5 |
| utp--glucose-1-phosphate uridylyltransferase galu | D4M06_RS17105 | Not Available | Negative | 3638126 - 3639034 | 32944.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




