Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein ompw | D4M06_RS17005 | Not Available | Negative | 3618033 - 3618671 | 22924.2 |
| upf0259 family protein | D4M06_RS17015 | Not Available | Positive | 3619028 - 3619771 | 26402.5 |
| septation protein a | D4M06_RS17020 | Not Available | Positive | 3619801 - 3620340 | 20791.3 |
| acyl-coa thioester hydrolase ycia | D4M06_RS17025 | Not Available | Positive | 3620445 - 3620843 | 14217.3 |
| tonb system transport protein tonb | D4M06_RS17030 | Not Available | Negative | 3620883 - 3621602 | 26080.6 |
| ycii family protein | D4M06_RS17035 | Not Available | Positive | 3621826 - 3622122 | 10602.6 |
| voltage-gated potassium channel protein | D4M06_RS17040 | Not Available | Positive | 3622423 - 3623676 | 46080.2 |
| yciy family protein | D4M06_RS17045 | Not Available | Negative | 3623731 - 3623904 | 7102.81 |
| cardiolipin synthase | D4M06_RS17050 | Not Available | Positive | 3624047 - 3625507 | 54792.5 |
| yciu family protein | D4M06_RS17055 | Not Available | Positive | 3625542 - 3625871 | 12687.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




