Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | D4M06_RS16665 | Not Available | Positive | 3569312 - 3570478 | 42191.6 |
| mfs transporter | D4M06_RS16670 | Not Available | Positive | 3570521 - 3571837 | 46995.3 |
| hth-type transcriptional repressor fabr | D4M06_RS16675 | Not Available | Positive | 3571941 - 3572591 | 24536.5 |
| yijd family membrane protein | D4M06_RS16680 | Not Available | Positive | 3572591 - 3572950 | 13024.3 |
| trna (uridine(54)-c5)-methyltransferase trma | D4M06_RS16685 | Not Available | Negative | 3572990 - 3574090 | 41911.3 |
| hypothetical protein | D4M06_RS16690 | Not Available | Negative | 3574405 - 3574989 | 22475.8 |
| tonb-dependent vitamin b12 receptor btub | D4M06_RS16985 | Not Available | Positive | 3613763 - 3615607 | 68360.7 |
| glutamate racemase | D4M06_RS16990 | Not Available | Positive | 3615552 - 3616409 | 31075.8 |
| excisionase | D4M06_RS16995 | Not Available | Positive | 3616631 - 3616879 | 9211.41 |
| tyrosine-type recombinase/integrase | D4M06_RS17000 | Not Available | Positive | 3616857 - 3617987 | 43170.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




