Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase/peroxidase hpi | D4M06_RS16565 | Not Available | Positive | 3542272 - 3544452 | 80044.0 |
| cystine transporter yije | D4M06_RS16570 | Not Available | Positive | 3544546 - 3545451 | 32853.4 |
| duf1287 domain-containing protein | D4M06_RS16575 | Not Available | Negative | 3545478 - 3546095 | 22981.3 |
| bifunctional l-1,2-propanediol dehydrogenase/glycerol dehydrogenase | D4M06_RS16580 | Not Available | Negative | 3546369 - 3547472 | 38730.4 |
| fructose-6-phosphate aldolase | D4M06_RS16585 | Not Available | Negative | 3547483 - 3548145 | 23507.5 |
| phosphoenolpyruvate--protein phosphotransferase | D4M06_RS16590 | Not Available | Negative | 3548157 - 3550658 | 91826.9 |
| pts fructose transporter subunit eiic | D4M06_RS16595 | Not Available | Positive | 3550967 - 3552046 | 37088.7 |
| pts fructose-like transporter subunit iib | D4M06_RS16600 | Not Available | Positive | 3552061 - 3552381 | 11248.6 |
| formate c-acetyltransferase | D4M06_RS16605 | Not Available | Positive | 3552432 - 3554729 | 85743.5 |
| [formate-c-acetyltransferase]-activating enzyme | D4M06_RS16610 | Not Available | Positive | 3554695 - 3555573 | 32508.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




