Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-xylosidase | D4M06_RS16450 | Not Available | Negative | 3518693 - 3521011 | 87917.9 |
| glycoside-pentoside-hexuronide family transporter | D4M06_RS16455 | Not Available | Negative | 3521021 - 3522403 | 50908.3 |
| Trna-sec(p) | Not Available | Not Available | Positive | 3522696 - 3522786 | Not Available |
| duf4329 domain-containing protein | D4M06_RS16525 | Not Available | Positive | 3534104 - 3534616 | 18920.1 |
| hypothetical protein | D4M06_RS16530 | Not Available | Positive | 3534618 - 3534854 | 8760.86 |
| yiix family permuted papain-like enzyme | D4M06_RS16540 | Not Available | Negative | 3535847 - 3536455 | 23156.0 |
| met regulon transcriptional regulator metj | D4M06_RS16545 | Not Available | Negative | 3536515 - 3536832 | 12141.4 |
| cystathionine gamma-synthase | D4M06_RS16550 | Not Available | Positive | 3537109 - 3538269 | 41538.8 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | D4M06_RS16555 | Not Available | Positive | 3538272 - 3540704 | 88993.9 |
| methylenetetrahydrofolate reductase | D4M06_RS16560 | Not Available | Positive | 3541053 - 3541943 | 33131.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




