Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dna ligase ligb | D4M06_RS16400 | Not Available | Negative | 3505277 - 3506959 | 63384.2 |
| guanylate kinase | D4M06_RS16405 | Not Available | Positive | 3507217 - 3507840 | 23652.1 |
| dna-directed rna polymerase subunit omega | D4M06_RS16410 | Not Available | Positive | 3507895 - 3508170 | 10237.2 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | D4M06_RS16415 | Not Available | Positive | 3508189 - 3510297 | 79347.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | D4M06_RS16420 | Not Available | Positive | 3510304 - 3510993 | 25344.6 |
| atp-dependent dna helicase recg | D4M06_RS16425 | Not Available | Positive | 3510999 - 3513080 | 76501.1 |
| hypothetical protein | D4M06_RS16430 | Not Available | Negative | 3513065 - 3513931 | 33220.7 |
| sodium/glutamate symporter | D4M06_RS16435 | Not Available | Negative | 3513934 - 3515139 | 42445.9 |
| xanthine/proton symporter xanp | D4M06_RS16440 | Not Available | Positive | 3515419 - 3516810 | 48871.2 |
| asma family protein | D4M06_RS16445 | Not Available | Positive | 3516931 - 3518640 | 62292.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




