Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative large subunit terminase | D4M06_RS24480 | Not Available | Positive | 5068081 - 5069787 | 65263.6 |
| Putative portal protein | D4M06_RS24485 | Not Available | Positive | 5069787 - 5071931 | 81052.1 |
| Hypothetical protein | D4M06_RS24490 | Not Available | Positive | 5072089 - 5073096 | 36711.4 |
| Putative major capsid protein | D4M06_RS24495 | Not Available | Positive | 5073120 - 5074334 | 44907.6 |
| Hypothetical protein | D4M06_RS24500 | Not Available | Positive | 5074390 - 5074779 | 13505.1 |
| Hypothetical protein | D4M06_RS24505 | Not Available | Positive | 5074829 - 5075290 | 17346.6 |
| Hypothetical protein | D4M06_RS24510 | Not Available | Positive | 5075274 - 5075837 | 21131.2 |
| Hypothetical protein | D4M06_RS24515 | Not Available | Positive | 5075837 - 5076487 | 23626.3 |
| Tail fiber protein | D4M06_RS24520 | Not Available | Positive | 5076484 - 5077901 | 46919.0 |
| Gp1 | D4M06_RS24605 | Not Available | Positive | 5088008 - 5088241 | 8458.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




