Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l28 | D4M06_RS16350 | Not Available | Negative | 3497224 - 3497460 | 9007.02 |
| jab domain-containing protein | D4M06_RS16355 | Not Available | Negative | 3497677 - 3498345 | 25259.9 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | D4M06_RS16360 | Not Available | Positive | 3498517 - 3499737 | 43440.7 |
| dutp diphosphatase | D4M06_RS16365 | Not Available | Positive | 3499715 - 3500173 | 16288.7 |
| nucleoid occlusion factor slma | D4M06_RS16370 | Not Available | Positive | 3500280 - 3500876 | 22837.7 |
| orotate phosphoribosyltransferase | D4M06_RS16375 | Not Available | Negative | 3500913 - 3501554 | 23538.3 |
| ribonuclease ph | D4M06_RS16380 | Not Available | Negative | 3501620 - 3502336 | 25313.4 |
| yicc family protein | D4M06_RS16385 | Not Available | Positive | 3502463 - 3503326 | 33160.9 |
| dna damage-inducible protein d | D4M06_RS16390 | Not Available | Positive | 3503547 - 3504371 | 31066.6 |
| trimeric intracellular cation channel family protein | D4M06_RS16395 | Not Available | Positive | 3504663 - 3505280 | 22049.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




