Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| divergent polysaccharide deacetylase family protein | D4M06_RS16250 | Not Available | Positive | 3476860 - 3477819 | 35370.8 |
| udp-glucuronate:lps(hepiii) glycosyltransferase | D4M06_RS16255 | Not Available | Negative | 3477825 - 3478841 | 39561.4 |
| l-threonine 3-dehydrogenase | D4M06_RS16260 | Not Available | Negative | 3479080 - 3480105 | 37204.2 |
| glycine c-acetyltransferase | D4M06_RS16265 | Not Available | Negative | 3480115 - 3481311 | 43119.5 |
| protein yibb | D4M06_RS16270 | Not Available | Negative | 3481586 - 3482443 | 33478.9 |
| adp-glyceromanno-heptose 6-epimerase | D4M06_RS16275 | Not Available | Positive | 3482747 - 3483679 | 34895.0 |
| adp-heptose--lps heptosyltransferase rfaf | D4M06_RS16280 | Not Available | Positive | 3483689 - 3484735 | 39029.4 |
| lipopolysaccharide heptosyltransferase rfac | D4M06_RS16285 | Not Available | Positive | 3484739 - 3485731 | 36856.1 |
| o-antigen ligase rfal | D4M06_RS16290 | Not Available | Positive | 3485728 - 3486936 | 46101.8 |
| lipopolysaccharide n-acetylglucosaminyltransferase | D4M06_RS16295 | Not Available | Negative | 3486972 - 3488114 | 43610.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




