Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator lldr | D4M06_RS16200 | Not Available | Positive | 3467825 - 3468601 | 29149.8 |
| quinone-dependent l-lactate dehydrogenase | D4M06_RS16205 | Not Available | Positive | 3468598 - 3469788 | 42760.7 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | D4M06_RS16210 | Not Available | Positive | 3469974 - 3470447 | 17752.3 |
| serine o-acetyltransferase | D4M06_RS16215 | Not Available | Negative | 3470500 - 3471321 | 29318.4 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | D4M06_RS16220 | Not Available | Negative | 3471401 - 3472420 | 36363.8 |
| protein-export chaperone secb | D4M06_RS16225 | Not Available | Negative | 3472420 - 3472887 | 17278.3 |
| glutaredoxin 3 | D4M06_RS16230 | Not Available | Negative | 3472950 - 3473201 | 9138.01 |
| rhodanese-like domain-containing protein | D4M06_RS16235 | Not Available | Negative | 3473343 - 3473774 | 15597.2 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | D4M06_RS16240 | Not Available | Positive | 3474019 - 3475563 | 56112.9 |
| murein hydrolase activator envc | D4M06_RS16245 | Not Available | Positive | 3475573 - 3476856 | 47469.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




