Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phospho-beta-glucosidase | D4M06_RS16050 | Not Available | Negative | 3435992 - 3437425 | 55109.3 |
| asch domain-containing protein | D4M06_RS16055 | Not Available | Positive | 3437470 - 3437781 | 11906.0 |
| hemolysin iii family protein | D4M06_RS16060 | Not Available | Positive | 3437945 - 3438604 | 23848.2 |
| pp_03181 | D4M06_RS16065 | Not Available | Negative | 3438681 - 3439661 | Not Available |
| fad assembly factor sdhe | D4M06_RS16070 | Not Available | Positive | 3439904 - 3440170 | 10547.7 |
| hypothetical protein | D4M06_RS16075 | Not Available | Positive | 3440151 - 3440558 | 16095.0 |
| flavodoxin fldb | D4M06_RS16080 | Not Available | Negative | 3440598 - 3441119 | 19701.2 |
| site-specific tyrosine recombinase xerd | D4M06_RS16085 | Not Available | Positive | 3441231 - 3442127 | 34248.4 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | D4M06_RS16090 | Not Available | Positive | 3442152 - 3442862 | 25623.1 |
| single-stranded-dna-specific exonuclease recj | D4M06_RS16095 | Not Available | Positive | 3442868 - 3444601 | 63335.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




