Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-formyltetrahydrofolate cyclo-ligase | D4M06_RS15995 | Not Available | Negative | 3425205 - 3425807 | 23242.3 |
| cell division protein zapa | D4M06_RS16005 | Not Available | Negative | 3426053 - 3426382 | 12594.9 |
| upf0149 family protein ygfb | D4M06_RS16010 | Not Available | Positive | 3426550 - 3427128 | 21230.8 |
| xaa-pro aminopeptidase | D4M06_RS16015 | Not Available | Positive | 3427154 - 3428479 | 49820.2 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | D4M06_RS16020 | Not Available | Positive | 3428476 - 3429654 | 42318.8 |
| fad-dependent 2-octaprenylphenol hydroxylase | D4M06_RS16025 | Not Available | Positive | 3429678 - 3430880 | 44220.2 |
| hypothetical protein | D4M06_RS16030 | Not Available | Negative | 3430954 - 3431037 | 3290.1 |
| glycine cleavage system aminomethyltransferase gcvt | D4M06_RS16035 | Not Available | Positive | 3431328 - 3432422 | 40192.1 |
| glycine cleavage system protein gcvh | D4M06_RS16040 | Not Available | Positive | 3432446 - 3432835 | 13811.8 |
| aminomethyl-transferring glycine dehydrogenase | D4M06_RS16045 | Not Available | Positive | 3432953 - 3435826 | 104353.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




