Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Terminase large subunit | D4M06_RS24320 | Not Available | Negative | 5035230 - 5037332 | 78965.0 |
| Terminase small subunit | D4M06_RS24325 | Not Available | Negative | 5037332 - 5037823 | 18544.1 |
| Hypothetical protein | D4M06_RS24330 | Not Available | Negative | 5038498 - 5038650 | 5768.38 |
| Endopeptidase | D4M06_RS24335 | Not Available | Negative | 5038638 - 5039105 | 17098.5 |
| Lysin | D4M06_RS24340 | Not Available | Negative | 5039102 - 5039599 | 17889.5 |
| Holin protein s-like protein | D4M06_RS24345 | Not Available | Negative | 5039599 - 5039814 | 7950.74 |
| hypothetical protein | D4M06_RS24350 | Not Available | Positive | 5039957 - 5040355 | 15243.7 |
| Hypothetical protein | D4M06_RS24355 | Not Available | Negative | 5040436 - 5040582 | 5398.23 |
| Hypothetical protein | D4M06_RS24470 | Not Available | Positive | 5067035 - 5067238 | 7455.13 |
| Putative small subunit terminase | D4M06_RS24475 | Not Available | Positive | 5067294 - 5068100 | 30459.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




