Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf554 domain-containing protein | D4M06_RS15695 | Not Available | Negative | 3367269 - 3367976 | 24661.6 |
| ornithine decarboxylase | D4M06_RS15700 | Not Available | Positive | 3368374 - 3370509 | 79482.6 |
| nucleoside permease | D4M06_RS15705 | Not Available | Negative | 3370559 - 3371815 | 46392.0 |
| membrane-bound lytic murein transglycosylase mltc | D4M06_RS15710 | Not Available | Negative | 3372017 - 3373096 | 40056.7 |
| oxidative damage protection protein | D4M06_RS15715 | Not Available | Negative | 3373161 - 3373436 | 10953.2 |
| a/g-specific adenine glycosylase | D4M06_RS15720 | Not Available | Negative | 3373464 - 3374516 | 39197.3 |
| trna (guanosine(46)-n7)-methyltransferase trmb | D4M06_RS15725 | Not Available | Positive | 3374677 - 3375396 | 27308.9 |
| duf469 domain-containing protein | D4M06_RS15730 | Not Available | Positive | 3375396 - 3375722 | 12867.1 |
| duf2884 domain-containing protein | D4M06_RS15735 | Not Available | Positive | 3375906 - 3376625 | 26430.8 |
| l-asparaginase 2 | D4M06_RS15740 | Not Available | Positive | 3376801 - 3377847 | 36852.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




