Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| curlin minor subunit csgb | D4M06_RS15595 | Not Available | Negative | 3354606 - 3355061 | 15882.8 |
| transcriptional regulator csgd | D4M06_RS15600 | Not Available | Positive | 3355815 - 3356465 | 24931.0 |
| curli production assembly/transport protein csge | D4M06_RS15605 | Not Available | Positive | 3356470 - 3356859 | 14879.6 |
| curli production assembly/transport protein csgf | D4M06_RS15610 | Not Available | Positive | 3356884 - 3357300 | 15056.7 |
| curli production assembly/transport protein csgg | D4M06_RS15615 | Not Available | Positive | 3357327 - 3358160 | 30559.0 |
| duf1097 domain-containing protein | D4M06_RS15620 | Not Available | Negative | 3358224 - 3358715 | 17081.5 |
| molecular chaperone | D4M06_RS15625 | Not Available | Negative | 3358817 - 3359371 | 20783.4 |
| phosphatase | D4M06_RS15630 | Not Available | Negative | 3359395 - 3360132 | 26833.9 |
| glyoxylate/hydroxypyruvate reductase ghra | D4M06_RS15635 | Not Available | Negative | 3360187 - 3361125 | 35361.4 |
| Trna-ser | Not Available | Not Available | Positive | 3361359 - 3361446 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




