Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acidic protein msyb | D4M06_RS15545 | Not Available | Positive | 3344829 - 3345203 | 14259.9 |
| ycek/yidq family lipoprotein | D4M06_RS15550 | Not Available | Negative | 3345204 - 3345431 | 8443.31 |
| glucans biosynthesis glucosyltransferase mdoh | D4M06_RS15555 | Not Available | Negative | 3345604 - 3348147 | 96942.7 |
| glucans biosynthesis protein mdog | D4M06_RS15560 | Not Available | Negative | 3348140 - 3349675 | 57885.4 |
| glucans biosynthesis protein mdoc | D4M06_RS15565 | Not Available | Positive | 3350068 - 3351225 | 44672.9 |
| phospholipase d family protein | D4M06_RS15570 | Not Available | Negative | 3351233 - 3352714 | 55931.7 |
| o-acetyl-adp-ribose deacetylase | D4M06_RS15575 | Not Available | Negative | 3352656 - 3353189 | 18881.5 |
| type 1 fimbrial protein | D4M06_RS15580 | Not Available | Negative | 3353284 - 3353595 | 11152.6 |
| curli assembly protein csgc | D4M06_RS15585 | Not Available | Negative | 3353716 - 3354048 | 11969.4 |
| curlin major subunit csga | D4M06_RS15590 | Not Available | Negative | 3354107 - 3354565 | 15100.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




