Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin 2 | D4M06_RS15485 | Not Available | Positive | 3334954 - 3335601 | 24351.6 |
| lipoprotein | D4M06_RS15490 | Not Available | Positive | 3335735 - 3336295 | 20470.9 |
| dihydroorotase | D4M06_RS15495 | Not Available | Positive | 3336401 - 3337447 | 38846.6 |
| dna damage-inducible protein i | D4M06_RS15500 | Not Available | Positive | 3337521 - 3337766 | 8949.43 |
| biofilm formation regulator bsss | D4M06_RS15505 | Not Available | Positive | 3338056 - 3338310 | 9633.29 |
| duf2770 domain-containing protein | D4M06_RS15515 | Not Available | Positive | 3339590 - 3339703 | 4719.1 |
| cytochrome b | D4M06_RS15520 | Not Available | Positive | 3339964 - 3340530 | 20709.5 |
| ycei family protein | D4M06_RS15525 | Not Available | Positive | 3340534 - 3341109 | 20913.6 |
| rhodanese-related sulfurtransferase | D4M06_RS15530 | Not Available | Negative | 3341151 - 3342203 | 39712.4 |
| lpxl/lpxp family kdo(2)-lipid iv(a) lauroyl/palmitoleoyl acyltransferasee | D4M06_RS15535 | Not Available | Positive | 3342428 - 3343348 | 35408.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




