Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body rod protein flgc | D4M06_RS15435 | Not Available | Negative | 3327166 - 3327570 | 13968.8 |
| flagellar basal body rod protein flgb | D4M06_RS15440 | Not Available | Negative | 3327574 - 3327990 | 15240.1 |
| flagellar basal body p-ring formation protein flga | D4M06_RS15445 | Not Available | Positive | 3328145 - 3328804 | 23398.4 |
| anti-sigma-28 factor flgm | D4M06_RS15450 | Not Available | Positive | 3328880 - 3329173 | 10355.2 |
| flagella biosynthesis chaperone flgn | D4M06_RS15455 | Not Available | Positive | 3329178 - 3329594 | 15867.9 |
| murein biosynthesis integral membrane protein murj | D4M06_RS15460 | Not Available | Negative | 3329634 - 3331169 | 55270.8 |
| gfo/idh/moca family oxidoreductase | D4M06_RS15465 | Not Available | Negative | 3331279 - 3332202 | 33720.5 |
| duf480 domain-containing protein | D4M06_RS15470 | Not Available | Negative | 3332204 - 3332851 | 24177.8 |
| ribosomal protein s5-alanine n-acetyltransferase | D4M06_RS15475 | Not Available | Negative | 3332862 - 3333446 | 22636.0 |
| multidrug efflux mfs transporter mdth | D4M06_RS15480 | Not Available | Positive | 3333682 - 3334890 | 44394.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




