Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail component | D4M06_RS24270 | Not Available | Negative | 5028673 - 5029059 | 14238.8 |
| Putative major tail subunit | D4M06_RS24275 | Not Available | Negative | 5029120 - 5029863 | 25667.1 |
| Putative tail component | D4M06_RS24280 | Not Available | Negative | 5029874 - 5030275 | 15035.7 |
| Putative tail component | D4M06_RS24285 | Not Available | Negative | 5030272 - 5030850 | 21479.6 |
| Hypothetical protein | D4M06_RS24290 | Not Available | Negative | 5030862 - 5031137 | 10131.2 |
| Hypothetical protein | D4M06_RS24295 | Not Available | Negative | 5031130 - 5031453 | 11071.3 |
| Head maturation protease | D4M06_RS24300 | Not Available | Negative | 5031540 - 5033567 | 73450.3 |
| Putative portal protein | D4M06_RS24305 | Not Available | Negative | 5033512 - 5033847 | 12368.3 |
| Portal protein | D4M06_RS24310 | Not Available | Negative | 5033969 - 5035093 | 41996.2 |
| Hypothetical protein | D4M06_RS24315 | Not Available | Negative | 5035021 - 5035233 | 8271.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




