Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein-releasing abc transporter permease subunit lolc | D4M06_RS15230 | Not Available | Negative | 3282401 - 3283600 | 43266.5 |
| acyltransferase family protein | D4M06_RS15235 | Not Available | Positive | 3283862 - 3284935 | 40823.9 |
| transcription-repair coupling factor | D4M06_RS15240 | Not Available | Positive | 3285063 - 3288509 | 129972.0 |
| l,d-transpeptidase ldtc | D4M06_RS15245 | Not Available | Positive | 3288653 - 3289615 | 34621.9 |
| multiple stress resistance protein bhsa | D4M06_RS15250 | Not Available | Negative | 3289698 - 3289955 | 8815.55 |
| tetr family copper-responsive transcriptional repressor comr | D4M06_RS15255 | Not Available | Positive | 3290196 - 3290828 | 23336.9 |
| glycine zipper 2tm domain-containing protein | D4M06_RS15260 | Not Available | Negative | 3290890 - 3291429 | 18944.7 |
| nad(p)/fad-dependent oxidoreductase | D4M06_RS15265 | Not Available | Negative | 3291656 - 3292960 | 47379.7 |
| alpha/beta hydrolase | D4M06_RS15270 | Not Available | Negative | 3293360 - 3293902 | 21227.4 |
| beta-n-acetylhexosaminidase | D4M06_RS15275 | Not Available | Negative | 3293925 - 3294950 | 37606.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




