Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS15180 | Not Available | Negative | 3274139 - 3274423 | 10875.7 |
| recombinase family protein | D4M06_RS15185 | Not Available | Positive | 3274545 - 3275104 | 21247.8 |
| excisionase | D4M06_RS15190 | Not Available | Positive | 3275170 - 3275439 | 10185.4 |
| tyrosine-type recombinase/integrase | D4M06_RS15195 | Not Available | Positive | 3275408 - 3276526 | 42695.4 |
| spermidine/putrescine abc transporter permease potc | D4M06_RS15200 | Not Available | Positive | 3276693 - 3277487 | 29112.7 |
| spermidine/putrescine abc transporter substrate-binding protein potd | D4M06_RS15205 | Not Available | Positive | 3277484 - 3278530 | 38792.9 |
| nad-dependent protein deacylase | D4M06_RS15210 | Not Available | Negative | 3278686 - 3279507 | 30938.2 |
| n-acetylglucosamine kinase | D4M06_RS15215 | Not Available | Negative | 3279523 - 3280434 | 33013.6 |
| lipoprotein-releasing abc transporter permease subunit lole | D4M06_RS15220 | Not Available | Negative | 3280463 - 3281707 | 45293.9 |
| lipoprotein-releasing abc transporter atp-binding protein lold | D4M06_RS15225 | Not Available | Negative | 3281707 - 3282408 | 25483.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




