Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase accessory protein fdhe | D4M06_RS14460 | Not Available | Positive | 3140658 - 3141587 | 34690.5 |
| hypothetical protein | D4M06_RS14465 | Not Available | Negative | 3141917 - 3142159 | 9325.03 |
| copg family transcriptional regulator | D4M06_RS14470 | Not Available | Negative | 3142376 - 3142594 | 8408.23 |
| transposase | D4M06_RS14475 | Not Available | Negative | 3143288 - 3144202 | 33692.8 |
| hypothetical protein | D4M06_RS14480 | Not Available | Negative | 3144209 - 3145102 | 33685.4 |
| fatty acid biosynthesis protein faby | D4M06_RS14485 | Not Available | Negative | 3145513 - 3146454 | 35339.4 |
| d-tyrosyl-trna(tyr) deacylase | D4M06_RS14490 | Not Available | Negative | 3146499 - 3146936 | 15951.0 |
| virulence factor brkb family protein | D4M06_RS14495 | Not Available | Negative | 3146933 - 3147805 | 32840.7 |
| glucose-1-phosphatase | D4M06_RS14500 | Not Available | Negative | 3147799 - 3148398 | 22777.1 |
| deor/glpr transcriptional regulator | D4M06_RS14505 | Not Available | Negative | 3148497 - 3149282 | 28509.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




