Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail needle and knob protein | D4M06_RS22620 | Not Available | Negative | 4718567 - 4719097 | 18899.2 |
| replication protein | D4M06_RS22625 | Not Available | Positive | 4719167 - 4719814 | 24835.6 |
| Attr | Not Available | Not Available | Positive | 4720015 - 4720026 | Not Available |
| hypothetical protein | D4M06_RS22630 | Not Available | Negative | 4720484 - 4721896 | 53437.3 |
| hypothetical protein | D4M06_RS22635 | Not Available | Negative | 4722083 - 4722259 | 6623.79 |
| Integrase | D4M06_RS22640 | Not Available | Positive | 4722562 - 4723188 | 23626.7 |
| Putative minor tail protein | D4M06_RS24250 | Not Available | Negative | 5024334 - 5024959 | 23155.9 |
| Putative minor tail protein | D4M06_RS24255 | Not Available | Negative | 5024969 - 5025298 | 12530.1 |
| Tail length tape measure protein | D4M06_RS24260 | Not Available | Negative | 5025298 - 5028363 | 112219.0 |
| Putative minor tail protein | D4M06_RS24265 | Not Available | Negative | 5028335 - 5028664 | 12350.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




