Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| envelope stress sensor histidine kinase cpxa | D4M06_RS14355 | Not Available | Positive | 3115587 - 3116960 | 51627.3 |
| 6-n-hydroxylaminopurine resistance protein | D4M06_RS14360 | Not Available | Negative | 3117066 - 3117740 | 25326.0 |
| 2-keto-3-deoxygluconate transporter | D4M06_RS14365 | Not Available | Negative | 3117889 - 3118872 | 33697.5 |
| superoxide dismutase | D4M06_RS14370 | Not Available | Negative | 3119132 - 3119752 | 23080.2 |
| hth-type transcriptional activator rhar | D4M06_RS14380 | Not Available | Negative | 3121068 - 3122006 | 35676.4 |
| hth-type transcriptional activator rhas | D4M06_RS14385 | Not Available | Negative | 3121990 - 3122826 | 32328.2 |
| rhamnulokinase | D4M06_RS14390 | Not Available | Positive | 3123114 - 3124583 | 54128.2 |
| l-rhamnose isomerase | D4M06_RS14395 | Not Available | Positive | 3124580 - 3125839 | 47204.9 |
| rhamnulose-1-phosphate aldolase | D4M06_RS14400 | Not Available | Positive | 3126014 - 3126838 | 30119.1 |
| l-rhamnose mutarotase | D4M06_RS14405 | Not Available | Positive | 3126848 - 3127162 | 12263.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




