Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biofilm formation regulator hmsp | D4M06_RS14155 | Not Available | Positive | 3070427 - 3072415 | 74525.0 |
| dicarboxylate/amino acid:cation symporter | D4M06_RS14160 | Not Available | Positive | 3072598 - 3073884 | 45411.1 |
| insulinase family protein | D4M06_RS14165 | Not Available | Positive | 3074105 - 3075601 | 55502.4 |
| sugar kinase | D4M06_RS14170 | Not Available | Negative | 3075697 - 3076626 | 33949.2 |
| cyclic-guanylate-specific phosphodiesterase | D4M06_RS14175 | Not Available | Positive | 3076858 - 3077625 | 29574.9 |
| asma family protein | D4M06_RS14180 | Not Available | Positive | 3077695 - 3079755 | 74443.8 |
| mhs family mfs transporter | D4M06_RS14185 | Not Available | Negative | 3079937 - 3081259 | 47240.9 |
| inner membrane protein yhjd | D4M06_RS14190 | Not Available | Negative | 3081671 - 3082684 | 37902.6 |
| lysr family transcriptional regulator | D4M06_RS14195 | Not Available | Negative | 3082733 - 3083704 | 36115.0 |
| response regulator transcription factor | D4M06_RS14200 | Not Available | Positive | 3084152 - 3084754 | 22587.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




