Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylate/hydroxypyruvate reductase ghrb | D4M06_RS14000 | Not Available | Negative | 3032306 - 3033280 | 35398.5 |
| ompa family lipoprotein | D4M06_RS14005 | Not Available | Negative | 3033384 - 3034043 | 22198.6 |
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | D4M06_RS14010 | Not Available | Positive | 3034196 - 3036529 | 85956.4 |
| n-acetyltransferase | D4M06_RS14015 | Not Available | Negative | 3036498 - 3036938 | 17173.9 |
| dna-3-methyladenine glycosylase i | D4M06_RS14020 | Not Available | Negative | 3036935 - 3037498 | 21152.3 |
| autotransporter outer membrane beta-barrel domain-containing protein | D4M06_RS14025 | Not Available | Positive | 3037656 - 3038354 | 25962.0 |
| mfs transporter | D4M06_RS14030 | Not Available | Positive | 3038583 - 3039785 | 42790.2 |
| long polar fimbria major subunit lpfa1 | D4M06_RS14035 | Not Available | Positive | 3040129 - 3040653 | 17970.1 |
| molecular chaperone lpfb | D4M06_RS14040 | Not Available | Positive | 3040718 - 3041404 | 25068.2 |
| minor fimbrial subunit lpfd | D4M06_RS14050 | Not Available | Positive | 3044021 - 3045076 | 37241.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




