Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS13950 | Not Available | Positive | 3024246 - 3024587 | 12553.0 |
| yiab family inner membrane protein | D4M06_RS13955 | Not Available | Positive | 3024633 - 3025070 | 16123.6 |
| acyltransferase | D4M06_RS13960 | Not Available | Negative | 3025112 - 3026107 | 37586.0 |
| hypothetical protein | D4M06_RS13965 | Not Available | Positive | 3026282 - 3026581 | 11340.8 |
| glycine--trna ligase subunit alpha | D4M06_RS13970 | Not Available | Positive | 3026676 - 3027587 | 34718.2 |
| glycine--trna ligase subunit beta | D4M06_RS13975 | Not Available | Positive | 3027597 - 3029666 | 76817.2 |
| type i toxin-antitoxin system toxin hoka | D4M06_RS13980 | Not Available | Positive | 3029989 - 3030141 | 5912.47 |
| rna chaperone/antiterminator cspa | D4M06_RS13985 | Not Available | Negative | 3030329 - 3030541 | 7403.66 |
| hth-type transcriptional regulator | D4M06_RS13990 | Not Available | Negative | 3030822 - 3031112 | 11033.5 |
| duf3053 domain-containing protein | D4M06_RS13995 | Not Available | Positive | 3031546 - 3032256 | 25664.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




