Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s dicluster domain-containing protein | D4M06_RS13900 | Not Available | Positive | 3010499 - 3010972 | 17435.1 |
| valine--pyruvate transaminase | D4M06_RS13905 | Not Available | Negative | 3011124 - 3012377 | 46689.9 |
| alpha-amylase | D4M06_RS13910 | Not Available | Negative | 3012555 - 3014585 | 75679.4 |
| protein bax | D4M06_RS13915 | Not Available | Positive | 3014905 - 3015729 | 30917.3 |
| xylr family transcriptional regulator | D4M06_RS13920 | Not Available | Negative | 3015837 - 3017015 | 44871.7 |
| xylose abc transporter permease xylh | D4M06_RS13925 | Not Available | Negative | 3017093 - 3018274 | 41033.5 |
| d-xylose abc transporter atp-binding protein | D4M06_RS13930 | Not Available | Negative | 3018252 - 3019793 | 56443.9 |
| d-xylose abc transporter substrate-binding protein | D4M06_RS13935 | Not Available | Negative | 3019871 - 3020863 | 35722.0 |
| xylose isomerase | D4M06_RS13940 | Not Available | Positive | 3021229 - 3022551 | 49668.6 |
| xylulokinase | D4M06_RS13945 | Not Available | Positive | 3022623 - 3024077 | 52592.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




