Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | D4M06_RS13690 | Not Available | Negative | 2956874 - 2958577 | 62797.5 |
| helix-turn-helix domain-containing protein | D4M06_RS13695 | Not Available | Negative | 2958574 - 2959323 | 28286.4 |
| ghot/ortt family toxin | D4M06_RS13700 | Not Available | Negative | 2959669 - 2959848 | 6642.54 |
| Trna-gly | Not Available | Not Available | Positive | 2961754 - 2961827 | Not Available |
| peptidoglycan dd-metalloendopeptidase family protein | D4M06_RS13715 | Not Available | Negative | 2961906 - 2962661 | 26540.0 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | D4M06_RS13720 | Not Available | Positive | 2963077 - 2965374 | 82742.0 |
| xanthine dehydrogenase fad-binding subunit xdhb | D4M06_RS13725 | Not Available | Positive | 2965385 - 2966263 | 31562.6 |
| xanthine dehydrogenase iron sulfur-binding subunit xdhc | D4M06_RS13730 | Not Available | Positive | 2966260 - 2966739 | 16950.8 |
| sigma-54-dependent transcriptional regulator | D4M06_RS13735 | Not Available | Negative | 2966779 - 2968557 | 66094.0 |
| knotted carbamoyltransferase ygew | D4M06_RS13740 | Not Available | Positive | 2969036 - 2970223 | 43988.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




