Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin peptidase-dependent protein | D4M06_RS13430 | Not Available | Negative | 2909993 - 2910556 | 20526.7 |
| prepilin peptidase-dependent protein | D4M06_RS13435 | Not Available | Negative | 2910547 - 2911017 | 17843.3 |
| thymidylate synthase | D4M06_RS13440 | Not Available | Negative | 2911201 - 2911995 | 30481.4 |
| prolipoprotein diacylglyceryl transferase | D4M06_RS13445 | Not Available | Negative | 2912002 - 2912877 | 33109.9 |
| phosphoenolpyruvate--protein phosphotransferase | D4M06_RS13450 | Not Available | Negative | 2913028 - 2915274 | 83748.8 |
| rna pyrophosphohydrolase | D4M06_RS13455 | Not Available | Negative | 2915287 - 2915817 | 20796.0 |
| dna mismatch repair endonuclease muth | D4M06_RS13460 | Not Available | Positive | 2916502 - 2917191 | 25500.9 |
| terc family protein | D4M06_RS13465 | Not Available | Positive | 2917260 - 2917973 | 26159.0 |
| lipoprotein ygdr | D4M06_RS13470 | Not Available | Positive | 2918111 - 2918329 | 7877.35 |
| nadp(h)-dependent aldo-keto reductase | D4M06_RS13475 | Not Available | Positive | 2918437 - 2919477 | 38457.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




