Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu(+)/ag(+) sensor histidine kinase cuss | D4M06_RS13380 | Not Available | Positive | 2891870 - 2893318 | 53955.5 |
| type vi secretion system tip protein vgrg | D4M06_RS13385 | Not Available | Positive | 2893912 - 2894528 | 23830.2 |
| amin domain-containing protein | D4M06_RS13390 | Not Available | Negative | 2894597 - 2895850 | 45637.1 |
| amino-acid n-acetyltransferase | D4M06_RS13395 | Not Available | Positive | 2896082 - 2897413 | 49198.1 |
| exodeoxyribonuclease v subunit alpha | D4M06_RS13400 | Not Available | Negative | 2897475 - 2899301 | 66814.1 |
| exodeoxyribonuclease v subunit beta | D4M06_RS13405 | Not Available | Negative | 2899301 - 2902843 | 134119.0 |
| pitrilysin | D4M06_RS13410 | Not Available | Negative | 2902836 - 2905724 | 107813.0 |
| exodeoxyribonuclease v subunit gamma | D4M06_RS13415 | Not Available | Negative | 2905900 - 2909268 | 128734.0 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | D4M06_RS13420 | Not Available | Negative | 2909281 - 2909604 | 11976.7 |
| duf2509 family protein | D4M06_RS13425 | Not Available | Negative | 2909589 - 2909996 | 14854.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




