Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1158 domain-containing protein | D4M06_RS13330 | Not Available | Positive | 2880585 - 2880833 | 9403.99 |
| mmcq/yjbr family dna-binding protein | D4M06_RS13335 | Not Available | Positive | 2880898 - 2881266 | 14051.1 |
| oxygen-insensitive nad(p)h nitroreductase | D4M06_RS13340 | Not Available | Positive | 2881360 - 2882013 | 23860.3 |
| mechanosensitive ion channel family protein | D4M06_RS13345 | Not Available | Positive | 2882121 - 2883368 | 46614.5 |
| phenylalanine transporter | D4M06_RS13350 | Not Available | Negative | 2883436 - 2884812 | 50675.3 |
| cu(+)/ag(+) efflux rnd transporter permease subunit cusa | D4M06_RS13355 | Not Available | Negative | 2884914 - 2888051 | 114545.0 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit cusb | D4M06_RS13360 | Not Available | Negative | 2888063 - 2889286 | 44325.4 |
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone cusf | D4M06_RS13365 | Not Available | Negative | 2889302 - 2889634 | 12213.8 |
| cu(+)/ag(+) efflux rnd transporter outer membrane channel cusc | D4M06_RS13370 | Not Available | Negative | 2889658 - 2891040 | 50717.8 |
| copper response regulator transcription factor cusr | D4M06_RS13375 | Not Available | Positive | 2891197 - 2891880 | 25396.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




