Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein uspg | D4M06_RS13180 | Not Available | Positive | 2846079 - 2846507 | 15937.1 |
| alkyl hydroperoxide reductase subunit f | D4M06_RS13185 | Not Available | Negative | 2846628 - 2848193 | 56180.4 |
| alkyl hydroperoxide reductase subunit c | D4M06_RS13190 | Not Available | Negative | 2848322 - 2848885 | 20762.5 |
| thiol:disulfide interchange protein dsbg | D4M06_RS13195 | Not Available | Positive | 2849257 - 2850003 | 27497.5 |
| lysr family transcriptional regulator | D4M06_RS13200 | Not Available | Positive | 2850213 - 2851115 | 34392.9 |
| phosphoadenosine phosphosulfate reductase | D4M06_RS13205 | Not Available | Positive | 2851262 - 2852482 | 47813.1 |
| parb-like nuclease domain-containing protein | D4M06_RS13210 | Not Available | Positive | 2852455 - 2853084 | 23912.7 |
| methionine-oxo-acid transaminase | D4M06_RS13215 | Not Available | Negative | 2853085 - 2854245 | 43019.3 |
| hydroxycarboxylate dehydrogenase hcxa | D4M06_RS13220 | Not Available | Positive | 2854354 - 2855442 | 39093.7 |
| ybdd/yjix family protein | D4M06_RS13225 | Not Available | Negative | 2855452 - 2855649 | 7467.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




