Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| [citrate (pro-3s)-lyase] ligase | D4M06_RS13130 | Not Available | Positive | 2836090 - 2837148 | 40015.3 |
| citrate lyase acyl carrier protein | D4M06_RS13135 | Not Available | Positive | 2837163 - 2837459 | 10689.9 |
| citrate (pro-3s)-lyase subunit beta | D4M06_RS13140 | Not Available | Positive | 2837456 - 2838364 | 33111.6 |
| citrate lyase subunit alpha | D4M06_RS13145 | Not Available | Positive | 2838375 - 2839907 | 55163.0 |
| citrate lyase holo-[acyl-carrier protein] synthase | D4M06_RS13150 | Not Available | Positive | 2839911 - 2840462 | 20271.5 |
| triphosphoribosyl-dephospho-coa synthase citg | D4M06_RS13155 | Not Available | Positive | 2840437 - 2841315 | 31702.5 |
| citrate/succinate antiporter citt | D4M06_RS13160 | Not Available | Positive | 2841366 - 2842829 | 53095.7 |
| ribonuclease i | D4M06_RS13165 | Not Available | Positive | 2842943 - 2843749 | 29591.0 |
| nucleoside diphosphate kinase regulator | D4M06_RS13170 | Not Available | Positive | 2843979 - 2844389 | 14928.0 |
| glutathione-dependent formaldehyde dehydrogenase | D4M06_RS13175 | Not Available | Negative | 2844620 - 2845858 | 44225.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




