Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator | D4M06_RS13080 | Not Available | Positive | 2826566 - 2827519 | 35867.4 |
| lipoyl synthase | D4M06_RS13085 | Not Available | Positive | 2827728 - 2828693 | 36073.8 |
| twin-arginine translocase subunit tate | D4M06_RS13090 | Not Available | Negative | 2828794 - 2828997 | 7024.71 |
| deaminated glutathione amidase | D4M06_RS13095 | Not Available | Negative | 2829126 - 2829914 | 28683.0 |
| fluoride efflux transporter crcb | D4M06_RS13100 | Not Available | Positive | 2830007 - 2830390 | 13766.1 |
| transcription antiterminator/rna stability regulator cspe | D4M06_RS13105 | Not Available | Negative | 2830444 - 2830653 | 7463.84 |
| phospholipid:lipid a palmitoyltransferase | D4M06_RS13110 | Not Available | Negative | 2830828 - 2831388 | 21798.7 |
| anaerobic c4-dicarboxylate transporter dcuc | D4M06_RS13115 | Not Available | Positive | 2831977 - 2833362 | 48415.3 |
| two-component response regulator dpia | D4M06_RS13120 | Not Available | Negative | 2833403 - 2834083 | 25454.9 |
| sensor histidine kinase dpib | D4M06_RS13125 | Not Available | Negative | 2834052 - 2835710 | 61717.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




