Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide adenylyltransferase | D4M06_RS13030 | Not Available | Positive | 2817370 - 2818011 | 24515.3 |
| adenosylcobalamin/alpha-ribazole phosphatase | D4M06_RS13035 | Not Available | Positive | 2818035 - 2818646 | 23386.8 |
| ribosome silencing factor | D4M06_RS13040 | Not Available | Positive | 2818906 - 2819223 | 11582.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | D4M06_RS13045 | Not Available | Positive | 2819227 - 2819694 | 17342.1 |
| peptidoglycan dd-transpeptidase mrda | D4M06_RS13050 | Not Available | Positive | 2819725 - 2821626 | 70860.6 |
| peptidoglycan glycosyltransferase mrdb | D4M06_RS13055 | Not Available | Positive | 2821629 - 2822741 | 40478.6 |
| endolytic peptidoglycan transglycosylase rlpa | D4M06_RS13060 | Not Available | Positive | 2822752 - 2823840 | 37555.1 |
| d-alanyl-d-alanine carboxypeptidase daca | D4M06_RS13065 | Not Available | Positive | 2823980 - 2825191 | 44446.5 |
| ybed family protein | D4M06_RS13070 | Not Available | Positive | 2825301 - 2825564 | 9827.92 |
| lipoyl(octanoyl) transferase lipb | D4M06_RS13075 | Not Available | Positive | 2825665 - 2826306 | 23884.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




