Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional siderophore receptor/adhesin iha | D4M06_RS12970 | Not Available | Positive | 2803528 - 2804463 | 33838.9 |
| molecular chaperone hscc | D4M06_RS12975 | Not Available | Positive | 2804547 - 2806217 | 61989.8 |
| duf1266 domain-containing protein | D4M06_RS12985 | Not Available | Negative | 2807725 - 2808432 | 27005.8 |
| sel1 repeat family protein | D4M06_RS12990 | Not Available | Positive | 2808534 - 2809088 | 20915.9 |
| j domain-containing protein | D4M06_RS12995 | Not Available | Negative | 2809098 - 2810525 | 55165.3 |
| duf1266 domain-containing protein | D4M06_RS13000 | Not Available | Negative | 2810522 - 2811229 | 27743.5 |
| zinc ribbon-containing protein | D4M06_RS13010 | Not Available | Negative | 2812441 - 2812923 | 18798.2 |
| leucine--trna ligase | D4M06_RS13015 | Not Available | Positive | 2813159 - 2815741 | 97239.0 |
| lps assembly lipoprotein lpte | D4M06_RS13020 | Not Available | Positive | 2815756 - 2816337 | 21319.7 |
| dna polymerase iii subunit delta | D4M06_RS13025 | Not Available | Positive | 2816337 - 2817368 | 38732.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




