Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yqij family protein | D4M06_RS12870 | Not Available | Negative | 2788038 - 2788652 | 22489.7 |
| cell surface composition regulator glgs | D4M06_RS12875 | Not Available | Positive | 2788921 - 2789121 | 7922.34 |
| accessory factor ubik family protein | D4M06_RS12880 | Not Available | Negative | 2789156 - 2789455 | 11389.7 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | D4M06_RS12885 | Not Available | Positive | 2789829 - 2790482 | 23354.9 |
| hypothetical protein | D4M06_RS12890 | Not Available | Positive | 2790744 - 2790914 | 6838.37 |
| zinc transporter zupt | D4M06_RS12895 | Not Available | Negative | 2790972 - 2791745 | 26486.5 |
| 4,5-dopa dioxygenase extradiol | D4M06_RS12900 | Not Available | Positive | 2791861 - 2792343 | 17713.5 |
| Trna-met | Not Available | Not Available | Positive | 2792398 - 2792474 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 2792523 - 2792597 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 2792635 - 2792709 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




